WEB-based GEne SeT AnaLysis Toolkit

Translating gene lists into biological insights...

Summary

Result Download

Job summary

  • Enrichment method: GSEA
  • Organism: mmusculus
  • Enrichment Categories: network_Transcription_Factor_target
  • Interesting list: textAreaUpload_1568400449.rnk. ID type: genesymbol
  • The interesting list contains 14543 user IDs in which 14265 user IDs are unambiguously mapped to 14265 unique entrezgene IDs and 278 user IDs can not be mapped to any entrezgene ID.
  • The GO Slim summary are based upon the 14265 unique entrezgene IDs.
  • Among the 14265 unique entrezgene IDs, 10900 IDs are annotated to the selected functional categories, which are used for the enrichment analysis.

Parameters for the enrichment analysis:

  • Minimum number of IDs in the category: 5
  • Maximum number of IDs in the category: 2000
  • Significance Level: FDR < 0.1
  • Number of permutation: 1000

Based on the above parameters, 2 positive related categories and 309 negative related categories are identified as enriched categories , in which 40 most significant categories and represetatives in the reduced sets are shown in this report. All significant categories can be downloaded from the 'Result Download' link.

GO Slim summary for the user uploaded IDs

Each Biological Process, Cellular Component and Molecular Function category is represented by a red, blue and green bar, repectively.

The height of the bar represents the number of IDs in the user list and also in the category.

Bar charts of enriched GO Slim terms

Enrichment Results

Redundancy reduction: All Affinity propagation Weighted set cover